Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924721.1_cds_XP_016473016.1_65190
CDS Infomation

[gene=LOC107794975] [db_xref=GeneID:107794975] [protein=putative cyclic nucleotide-gated ion channel 18] [partial=5'] [protein_id=XP_016473016.1] [location=complement(join(57921..58670,59162..59398,60065..60176,61879..62192,62302..62514,63020..>63172))] [gbkey=CDS]
Sequence

CATATTATTATGAAGTTTCGAACGGCTTTTGTGGCGCCCAGCTCGAGGGTTTTTGGCCGG
GGTGAGCTTGTTATGGATGCCAAAGAAATTGCGATTCGGTACCTCAAGACTGATTTAATT
GTTGATTTTACTGCCGCGCTTCCCCTGCCTCAAATCGTCATTAAATATGTAATACCCGCA
GCTAAAAGAAATGGATCTGGTCACTCCAAAAGTACTCTTGCTCTTATCGTTCTCATCCAA
TACGTGCCAAGGTTGTTCGTTATTTTTCCGTTAAATCAGCAGATTATCAAAACTACAGGT
TTTATTGCTAAAACAGCTTGGGCAGGAGCAGCTTACAATCTCCTTCTTTTCATGTTAGCC
AGTCATGTGGCAGGAGCTTCGTGGTATGTGGCATCTATAGGAAGACAGTACTCTTGCTGG
TCGAATGAATGTAAGAAGGAACGTGATGCAGTTCCACCGTGCGTGCCTGATTTCTTAGAT
TGTACAAGTGATACGGATACATATGTACGTGATTATTGGCGAAACAGCACGCAAGTGCTT
GTAAAATGTGATGCTATAAATGATGAAGATTCTGGTTTTAAGTTTGGAATTTTCGCTAAC
GCCTTTACTAATGAAGTGGCTTCATCAACATTCATGGAGAAATATTTATACTGTCTTTGG
TGGGGTCTAAGAAATTTGAGTTCATATGGGCAGAATTTGAATACTAGCACTTATATTGGC
GAAACATTATTCAGCATTTCCCTATGCATCATTGGCTTAGTTCTCTTTGCACAGCTTATT
GGAAACATGCAGACTTATCTGCAATCTATGACCGTAAAAATTGAGGAATGGAGAATTAGA
AAAAGAGATATAGAAGAATGGATGAGGCACCGACAGTTGCCTGAAGACTTGCAAGAACGT
GTTCGCCGTTTTGATCAATGTAAATGGCTTGCTACAAGAGGAGTTAATGAAGAAGACATC
TTGCAATCTTTGCCTTTGGATCTTCGTCGTCAAATCCAAAGACACCTATGCCTTAAACTT
GTTCGACGAGTTCCATTTTTTGCACAAATGGACGATCAGCTGCTTGATGCAATTTGCGAA
CGACTAGTCTCGTCCCTAAGCATAAAGGGTACTTATGTTGTTCGAGAAGGCGATCCAGTT
AATGAGATGTTCTTTATCATCAGGGGACAACTAGAGAGCTCCACGACAAATGGGGGAAGA
TCTGGATTCTTCAATTCTATCACTCTTAGACCTGGTGATTTCTGTGGTGAAGAATTGCTG
ACATGGGCCTTAGTTCCTAATACAACGCAATTGCCTTCTTCAACTCGAACTGTGAGAACA
CTTTCTGAAGTTGAAGCATTTGCACTTCGAGCTGAAGACCTGAAATTTTTCGCGGTTCAG
TTTAAACGTCTTCACAGTAAGAAGCTACAACATGCATTCAGGTATTATTCTCAACAGTGG
AGAACATGGGGTGCTTGCTTAATACAGGCGGCATGGAGAAGGTATAGGAAGAAAAAGATG
GAAACTGAATTGGCTTTACAAGAGAGCTATTATTATAATCAAGATCCTAACAACAATAAT
GATCAAAATTATGAGGCTTTTGAAGATGTTGGTCTTGAGCAACCATTGGTAGGCAGTGCT
CATAATTCCCAACAACTTGGAGCTACAATTTTGGCTAAAAGATTTGCTACTAATACGAGA
AGAGGAATAGAACAGAAGATTCAGATGACTGATTCTTCTTCCAGCTTAAAGATGCCCAAG
TTGTTTAAGCCAGATGAGCCTGATTTTTCTGCAGAATGA

Peptide Sequence

PEP ID

XP_016473016.1
PEP Infomation

PREDICTED: putative cyclic nucleotide-gated ion channel 18, partial [Nicotiana tabacum]
Sequence

HIIMKFRTAFVAPSSRVFGRGELVMDAKEIAIRYLKTDLIVDFTAALPLPQIVIKYVIPA
AKRNGSGHSKSTLALIVLIQYVPRLFVIFPLNQQIIKTTGFIAKTAWAGAAYNLLLFMLA
SHVAGASWYVASIGRQYSCWSNECKKERDAVPPCVPDFLDCTSDTDTYVRDYWRNSTQVL
VKCDAINDEDSGFKFGIFANAFTNEVASSTFMEKYLYCLWWGLRNLSSYGQNLNTSTYIG
ETLFSISLCIIGLVLFAQLIGNMQTYLQSMTVKIEEWRIRKRDIEEWMRHRQLPEDLQER
VRRFDQCKWLATRGVNEEDILQSLPLDLRRQIQRHLCLKLVRRVPFFAQMDDQLLDAICE
RLVSSLSIKGTYVVREGDPVNEMFFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELL
TWALVPNTTQLPSSTRTVRTLSEVEAFALRAEDLKFFAVQFKRLHSKKLQHAFRYYSQQW
RTWGACLIQAAWRRYRKKKMETELALQESYYYNQDPNNNNDQNYEAFEDVGLEQPLVGSA
HNSQQLGATILAKRFATNTRRGIEQKIQMTDSSSSLKMPKLFKPDEPDFSAE

Transcript Sequence

Gene sequence data has not been registered.